PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT18619
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 258aa    MW: 28434.6 Da    PI: 5.8071
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT18619genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY635.3e-2084150259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS......STTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae......dpkvveitYegeHnhe 59 
                Dg++WrKYGqK ++ +++prsYY+Ct++   +C+++k v+++++      dp +  ++Y g+H+++
  EMT18619  84 YDGHQWRKYGQKIINHTKHPRSYYKCTYKqeqDCRATKTVQQQQQddgvddDPAMYAVVYYGQHTCK 150
               59**************************98999********9875222222799***********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-2378150IPR003657WRKY domain
SuperFamilySSF1182902.35E-2179150IPR003657WRKY domain
SMARTSM007743.6E-3083151IPR003657WRKY domain
PfamPF031066.2E-2485150IPR003657WRKY domain
PROSITE profilePS5081115.65285129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MFESILDCSA KAIAALKLLR LDHSQVDDAV LPTAMVDDKT RVRKIVTGDG EKDGDDNAKP  60
LRRQRKRRRL ADDSVALETP VPHYDGHQWR KYGQKIINHT KHPRSYYKCT YKQEQDCRAT  120
KTVQQQQQDD GVDDDPAMYA VVYYGQHTCK PGQTDAAVVE TASTGRCGEG GGEELARSSS  180
QCSNISVTCS SVVVDHHQTT TASLESSCNL LDMAGDLATA EVNQYDQLFD VASFSPLGLG  240
TAWEMDMSGH GLQKFGGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16468RKRRR
26569KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577134.32e-80PREDICTED: probable WRKY transcription factor 70
TrEMBLN1R0S90.0N1R0S9_AEGTA; Putative WRKY transcription factor 62
STRINGBRADI4G44370.14e-80(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.11e-15WRKY DNA-binding protein 62